Package: cytominer 0.2.2.9000
Shantanu Singh
cytominer: Methods for Image-Based Cell Profiling
`cytominer` is a suite of common functions used to process high-dimensional readouts from image-based cell profiling experiments.
Authors:
cytominer_0.2.2.9000.tar.gz
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cytominer.pdf |cytominer.html✨
cytominer/json (API)
NEWS
| # Install 'cytominer' in R: |
| install.packages('cytominer', repos = c('https://cytomining.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/cytomining/cytominer/issues
Last updated 1 years agofrom:d911eb5bc1. Checks:OK: 1 NOTE: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 13 2024 |
| R-4.5-win | NOTE | Nov 13 2024 |
| R-4.5-linux | NOTE | Nov 13 2024 |
| R-4.4-win | NOTE | Nov 13 2024 |
| R-4.4-mac | NOTE | Nov 13 2024 |
| R-4.3-win | NOTE | Nov 13 2024 |
| R-4.3-mac | NOTE | Nov 13 2024 |
Exports:aggregatecorrelation_thresholdcount_na_rowscovariancedrop_na_columnsdrop_na_rowsextract_subpopulationsfind_significant_pcsgeneralized_loggenerate_component_matrixhuskmark_outlier_rowsnormalizereplicate_correlationsparse_random_projectionspherizestratifysvd_entropytransformvariable_importancevariable_selectvariance_threshold
Dependencies:caretclasscliclockcodetoolscolorspacecpp11data.tablediagramdigestdoParalleldplyre1071fansifarverforeachformatRfutile.loggerfutile.optionsfuturefuture.applygenericsggplot2globalsgluegowergtablehardhatipredisobanditeratorsKernSmoothlabelinglambda.rlatticelavalifecyclelistenvlubridatemagrittrMASSMatrixmgcvModelMetricsmunsellnlmennetnumDerivparallellypillarpkgconfigplyrpROCprodlimprogressrproxypurrrR6RColorBrewerRcpprecipesreshape2rlangrpartscalesshapeSQUAREMstringistringrsurvivaltibbletidyrtidyselecttimechangetimeDatetzdbutf8vctrsviridisLitewithr
